Proteomic Signature Library for
Staphylococcus aureus COL
  • show
  • profiles
  • threshold (highlighter):
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      summary

      • modus:
      • pattern search
      • expression template:
      • Upp 2
      • highlighter:
      • 2-fold change
      • sorting:
      • descending similarity to expression template (ascending Euclidean distance)
      • limit:
      • 10
       

      expression plots

      • y-axis:
      • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
      • x-axis:
      • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
      • experiments
      • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
      • color code
      • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
      • significnace:
      • asterisks (*) mark significant changes (details)
      • multiple spots:
      • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
      • protein overlap:
      • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
      • plot order:
      • descending similarity to expression template (ascending Euclidean distance)
       
      • Upp 2 (2)
      • SACOL2104
      • uracil phosphoribosyltransferase
      • show on gel show on gel
      • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: salvage of nucleosides and nucleotides)
      • expression plot for Upp 2
      • TrxB 1 (2)
      • SACOL0829
      • thioredoxin-disulfide reductase
      • show on gel show on gel
      • detoxification (energy metabolism: electron transport)
      • expression plot for TrxB 1
      • SACOL0945 2 (2)
      • SACOL0945
      • cytosol aminopeptidase
      • show on gel show on gel
      • protein fate (protein fate: degradation of proteins, peptides, and glycopeptides)
      • expression plot for SACOL0945 2
      • AccA 2 (2)
      • SACOL1747
      • acetyl-CoA carboxylase, carboxyl transferase, alpha subunit
      • show on gel show on gel
      • fatty acid and phospholipid metabolism (fatty acid and phospholipid metabolism: biosynthesis)
      • co-localization with: FbaA 2 (H2O2, fermentation)
      • expression plot for AccA 2
      • SACOL1891 1 (2)
      • SACOL1891
      • RNAIII-activating protein TRAP
      • show on gel show on gel
      • virulence (cellular processes: pathogenesis)
      • expression plot for SACOL1891 1
      • SACOL0959
      • SACOL0959
      • NADH-dependent flavin oxidoreductase, Oye family
      • show on gel show on gel
      • electron transport (unknown function: enzymes of unknown specificity)
      • expression plot for SACOL0959
      • SACOL0633
      • SACOL0633
      • conserved hypothetical protein
      • show on gel show on gel
      • unknown function or specifity (hypothetical proteins: conserved)
      • co-localization with: ProC (H2O2, paraquat, NO, fermentation, NO3 resp., heat, puromycin, mupi.)
      • expression plot for SACOL0633
      • SACOL0314
      • SACOL0314
      • conserved hypothetical protein
      • show on gel show on gel
      • unknown function or specifity (hypothetical proteins: conserved)
      • expression plot for SACOL0314
      • Bcp
      • SACOL1921
      • bacterioferritin comigratory protein
      • show on gel show on gel
      • detoxification (unknown function: general)
      • regulation: PerR
      • expression plot for Bcp
      • SACOL1457
      • SACOL1457
      • PTS system, IIA component
      • show on gel show on gel
      • transport (transport and binding proteins: carbohydrates, organic alcohols, and acids)
      • expression plot for SACOL1457
       

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