Proteomic Signature Library for
Staphylococcus aureus COL
  • show
  • profiles
  • threshold (highlighter):
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      summary

      • modus:
      • pattern search
      • expression template:
      • SACOL1985
      • highlighter:
      • 2-fold change
      • sorting:
      • descending similarity to expression template (ascending Euclidean distance)
      • limit:
      • 10
       

      expression plots

      • y-axis:
      • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
      • x-axis:
      • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
      • experiments
      • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
      • color code
      • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
      • significnace:
      • asterisks (*) mark significant changes (details)
      • multiple spots:
      • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
      • protein overlap:
      • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
      • plot order:
      • descending similarity to expression template (ascending Euclidean distance)
       
      • SACOL1985
      • SACOL1985
      • conserved hypothetical protein
      • show on gel show on gel
      • unknown function or specifity (hypothetical proteins: conserved)
      • regulation: SigB-
      • expression plot for SACOL1985
      • QueA
      • SACOL1695
      • S-adenosylmethionine:tRNA ribosyltransferase-isomerase
      • show on gel show on gel
      • translation (protein synthesis: trna and rrna base modification)
      • expression plot for QueA
      • PyrC
      • SACOL1213
      • dihydroorotase
      • show on gel show on gel
      • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: pyrimidine ribonucleotide biosynthesis)
      • co-localization with: FabF (diamide, paraquat, NO, fermentation, NO3 resp., heat, puromycin, mupi.)
      • regulation: PyrR
      • expression plot for PyrC
      • RsbW 2 (2)
      • SACOL2055
      • anti-sigma B factor
      • show on gel show on gel
      • regulation (cellular processes: adaptations to atypical conditions)
      • regulation: SigB+
      • expression plot for RsbW 2
      • PurD
      • SACOL1083
      • phosphoribosylamine--glycine ligase
      • show on gel show on gel
      • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: purine ribonucleotide biosynthesis)
      • regulation: PurR
      • expression plot for PurD
      • SACOL1677
      • SACOL1677
      • aminotransferase, class V
      • show on gel show on gel
      • unknown function or specifity (unknown function: enzymes of unknown specificity)
      • expression plot for SACOL1677
      • TypA
      • SACOL1118
      • GTP-binding protein TypA
      • show on gel show on gel
      • unknown function or specifity (unknown function: general)
      • expression plot for TypA
      • NrdE 1 (2)
      • SACOL0792
      • ribonucleoside-diphosphate reductase, alpha subunit
      • show on gel show on gel
      • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: 2'-deoxyribonucleotide metabolism)
      • co-localization with: ThrS 2 (H2O2, NO), ThrS 1 (H2O2, diamide), ThrS 3 (paraquat)
      • regulation: NrdR
      • expression plot for NrdE 1
      • SACOL0556
      • SACOL0556
      • chaperonin, 33 kDa
      • show on gel show on gel
      • protein fate (protein fate: protein folding and stabilization)
      • expression plot for SACOL0556
      • FbaA 4 (4)
      • SACOL2117
      • fructose-bisphosphate aldolase, class II
      • show on gel show on gel
      • glycolysis/gluconeogenesis (energy metabolism: glycolysis/gluconeogenesis)
      • regulation: CcpA
      • expression plot for FbaA 4
       

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