Proteomic Signature Library for
Staphylococcus aureus COL
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  • profiles
  • threshold (highlighter):
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      summary

      • modus:
      • pattern search
      • expression template:
      • SACOL1912 1
      • highlighter:
      • 2-fold change
      • sorting:
      • descending similarity to expression template (ascending Euclidean distance)
      • limit:
      • 10
       

      expression plots

      • y-axis:
      • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
      • x-axis:
      • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
      • experiments
      • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
      • color code
      • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
      • significnace:
      • asterisks (*) mark significant changes (details)
      • multiple spots:
      • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
      • protein overlap:
      • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
      • plot order:
      • descending similarity to expression template (ascending Euclidean distance)
       
      • PabA
      • SACOL0773
      • para-aminobenzoate synthase, glutamine amidotransferase, component II
      • show on gel show on gel
      • biosynthesis of cofactors, prosthetic groups, and carriers (biosynthesis of cofactors, prosthetic groups, and carriers: folic acid)
      • co-localization with: SACOL1912 1 (H2O2, diamide, fermentation, NO3 resp., heat, mupi.)
      • expression plot for PabA
      • SACOL1912 1 (3)
      • SACOL1912
      • glucosamine-6-phosphate isomerase, putative
      • show on gel show on gel
      • central intermediary metabolism (central intermediary metabolism: amino sugars)
      • co-localization with: PabA (H2O2, diamide, fermentation, NO3 resp., heat, mupi.)
      • regulation: SigB+
      • expression plot for SACOL1912 1
      • AccC
      • SACOL1571
      • acetyl-CoA carboxylase, biotin carboxylase
      • show on gel show on gel
      • fatty acid and phospholipid metabolism (fatty acid and phospholipid metabolism: biosynthesis)
      • expression plot for AccC
      • SACOL0429 2 (5)
      • SACOL0429
      • 5-methyltetrahydrofolate--homocysteine methyltransferase, putative
      • show on gel show on gel
      • amino acid biosynthesis (amino acid biosynthesis: aspartate family)
      • regulation: CodY, T-box(Met)
      • expression plot for SACOL0429 2
      • GluD
      • SACOL0961
      • glutamate dehydrogenase, NAD-specific
      • show on gel show on gel
      • amino acid biosynthesis (amino acid biosynthesis: glutamate family)
      • regulation: CcpA
      • expression plot for GluD
      • SufD 3 (4)
      • SACOL0915
      • FeS assembly protein SufD
      • show on gel show on gel
      • biosynthesis of cofactors, prosthetic groups, and carriers (biosynthesis of cofactors, prosthetic groups, and carriers: other)
      • co-localization with: Hom (H2O2)
      • regulation: PerR
      • expression plot for SufD 3
      • QueA
      • SACOL1695
      • S-adenosylmethionine:tRNA ribosyltransferase-isomerase
      • show on gel show on gel
      • translation (protein synthesis: trna and rrna base modification)
      • expression plot for QueA
      • FabI 1 (3)
      • SACOL1016
      • enoyl-(acyl-carrier-protein) reductase
      • show on gel show on gel
      • fatty acid and phospholipid metabolism (fatty acid and phospholipid metabolism: biosynthesis)
      • regulation: FapR
      • expression plot for FabI 1
      • GlyA 2 (3)
      • SACOL2105
      • serine hydroxymethyltransferase
      • show on gel show on gel
      • amino acid biosynthesis (amino acid biosynthesis: serine family)
      • co-localization with: MurAA (NO3 resp.)
      • expression plot for GlyA 2
      • FabF
      • SACOL0988
      • 3-oxoacyl-(acyl-carrier-protein) synthase II
      • show on gel show on gel
      • fatty acid and phospholipid metabolism (fatty acid and phospholipid metabolism: biosynthesis)
      • co-localization with: PyrC (diamide, paraquat, NO, fermentation, NO3 resp., heat, puromycin, mupi.)
      • regulation: FapR
      • expression plot for FabF
       

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