Proteomic Signature Library for
Staphylococcus aureus COL
  • show
  • profiles
  • threshold (highlighter):
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      summary

      • modus:
      • pattern search
      • expression template:
      • SACOL1787 3
      • highlighter:
      • 2-fold change
      • sorting:
      • descending similarity to expression template (ascending Euclidean distance)
      • limit:
      • 10
       

      expression plots

      • y-axis:
      • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
      • x-axis:
      • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
      • experiments
      • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
      • color code
      • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
      • significnace:
      • asterisks (*) mark significant changes (details)
      • multiple spots:
      • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
      • protein overlap:
      • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
      • plot order:
      • descending similarity to expression template (ascending Euclidean distance)
       
      • SACOL1787 3 (3)
      • SACOL1787
      • chorismate mutase/phospho-2-dehydro-3-deoxyheptonate aldolase
      • show on gel show on gel
      • amino acid biosynthesis (amino acid biosynthesis: aromatic amino acid family)
      • expression plot for SACOL1787 3
      • Cbf1
      • SACOL1898
      • cmp-binding-factor 1
      • show on gel show on gel
      • regulation (mobile and extrachromosomal element functions: plasmid functions)
      • expression plot for Cbf1
      • SACOL1096
      • SACOL1096
      • TrkA potassium uptake family protein
      • show on gel show on gel
      • transport (transport and binding proteins: cations and iron carrying compounds)
      • expression plot for SACOL1096
      • HprK
      • SACOL0825
      • HPr kinase/phosphatase
      • show on gel show on gel
      • transport (transport and binding proteins: carbohydrates, organic alcohols, and acids)
      • expression plot for HprK
      • SACOL2518
      • SACOL2518
      • conserved hypothetical protein
      • show on gel show on gel
      • unknown function or specifity (hypothetical proteins: conserved)
      • expression plot for SACOL2518
      • Mqo2 2 (3)
      • SACOL2623
      • malate:quinone oxidoreductase
      • show on gel show on gel
      • pyruvate dehydrogenase and tca cyle (energy metabolism: tca cycle)
      • co-localization with: PurF 2 (H2O2, diamide, paraquat, fermentation)
      • expression plot for Mqo2 2
      • Pta
      • SACOL0634
      • phosphate acetyltransferase
      • show on gel show on gel
      • fermentation (central intermediary metabolism: other)
      • expression plot for Pta
      • PurF 2 (2)
      • SACOL1079
      • amidophosphoribosyltransferase
      • show on gel show on gel
      • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: purine ribonucleotide biosynthesis)
      • co-localization with: Mqo2 2 (H2O2, diamide, paraquat, fermentation)
      • regulation: PurR
      • expression plot for PurF 2
      • SACOL1307
      • SACOL1307
      • conserved hypothetical protein TIGR00282
      • show on gel show on gel
      • unknown function or specifity (hypothetical proteins: conserved)
      • expression plot for SACOL1307
      • Mqo2 1 (3)
      • SACOL2623
      • malate:quinone oxidoreductase
      • show on gel show on gel
      • pyruvate dehydrogenase and tca cyle (energy metabolism: tca cycle)
      • expression plot for Mqo2 1
       

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