Proteomic Signature Library for
Staphylococcus aureus COL
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  • profiles
  • threshold (highlighter):
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      summary

      • modus:
      • pattern search
      • expression template:
      • SACOL0916 1
      • highlighter:
      • 2-fold change
      • sorting:
      • descending similarity to expression template (ascending Euclidean distance)
      • limit:
      • 10
       

      expression plots

      • y-axis:
      • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
      • x-axis:
      • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
      • experiments
      • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
      • color code
      • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
      • significnace:
      • asterisks (*) mark significant changes (details)
      • multiple spots:
      • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
      • protein overlap:
      • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
      • plot order:
      • descending similarity to expression template (ascending Euclidean distance)
       
      • SACOL0916 1 (2)
      • SACOL0916
      • cysteine desulfurase, SufS subfamily
      • show on gel show on gel
      • biosynthesis of cofactors, prosthetic groups, and carriers (biosynthesis of cofactors, prosthetic groups, and carriers: other)
      • regulation: PerR
      • expression plot for SACOL0916 1
      • SACOL0914
      • SACOL0914
      • FeS assembly ATPase SufC
      • show on gel show on gel
      • biosynthesis of cofactors, prosthetic groups, and carriers (biosynthesis of cofactors, prosthetic groups, and carriers: other)
      • regulation: PerR, SigB+
      • expression plot for SACOL0914
      • RpoD
      • SACOL1618
      • RNA polymerase sigma factor RpoD
      • show on gel show on gel
      • transcription (transcription: transcription factors)
      • expression plot for RpoD
      • SACOL1445
      • SACOL1445
      • CbbQ/NirQ/NorQ/GpvN family protein
      • show on gel show on gel
      • unknown function or specifity (unknown function: general)
      • expression plot for SACOL1445
      • SACOL0917
      • SACOL0917
      • NifU domain protein
      • show on gel show on gel
      • unknown function or specifity (unknown function: general)
      • co-localization with: RsbW 1 (diamide, paraquat, NO, fermentation, NO3 resp., puromycin, mupi.)
      • regulation: PerR
      • expression plot for SACOL0917
      • SACOL1096
      • SACOL1096
      • TrkA potassium uptake family protein
      • show on gel show on gel
      • transport (transport and binding proteins: cations and iron carrying compounds)
      • expression plot for SACOL1096
      • SACOL1751
      • SACOL1751
      • DHH subfamily 1 protein
      • show on gel show on gel
      • unknown function or specifity (unknown function: general)
      • expression plot for SACOL1751
      • SACOL0240
      • SACOL0240
      • 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, putative
      • show on gel show on gel
      • biosynthesis of cofactors, prosthetic groups, and carriers (biosynthesis of cofactors, prosthetic groups, and carriers: other)
      • expression plot for SACOL0240
      • FtsZ
      • SACOL1199
      • cell division protein FtsZ
      • show on gel show on gel
      • cell division (cellular processes: cell division)
      • co-localization with: GlpK (H2O2)
      • expression plot for FtsZ
      • Pta
      • SACOL0634
      • phosphate acetyltransferase
      • show on gel show on gel
      • fermentation (central intermediary metabolism: other)
      • expression plot for Pta
       

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