Proteomic Signature Library for
Staphylococcus aureus COL
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  • profiles
  • threshold (highlighter):
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      summary

      • modus:
      • pattern search
      • expression template:
      • SACOL0914
      • highlighter:
      • 2-fold change
      • sorting:
      • descending similarity to expression template (ascending Euclidean distance)
      • limit:
      • 10
       

      expression plots

      • y-axis:
      • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
      • x-axis:
      • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
      • experiments
      • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
      • color code
      • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
      • significnace:
      • asterisks (*) mark significant changes (details)
      • multiple spots:
      • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
      • protein overlap:
      • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
      • plot order:
      • descending similarity to expression template (ascending Euclidean distance)
       
      • SACOL0914
      • SACOL0914
      • FeS assembly ATPase SufC
      • show on gel show on gel
      • biosynthesis of cofactors, prosthetic groups, and carriers (biosynthesis of cofactors, prosthetic groups, and carriers: other)
      • regulation: PerR, SigB+
      • expression plot for SACOL0914
      • SufD 1 (4)
      • SACOL0915
      • FeS assembly protein SufD
      • show on gel show on gel
      • biosynthesis of cofactors, prosthetic groups, and carriers (biosynthesis of cofactors, prosthetic groups, and carriers: other)
      • co-localization with: SerA 2 (H2O2), SufD 2 (H2O2, paraquat, NO, fermentation), KatA 5 (H2O2, paraquat)
      • regulation: PerR
      • expression plot for SufD 1
      • SodA1
      • SACOL0118
      • superoxide dismutase
      • show on gel show on gel
      • detoxification (cellular processes: detoxification)
      • regulation: CodY, SigB-
      • expression plot for SodA1
      • GlmM
      • SACOL2151
      • phosphoglucosamine mutase GlmM
      • show on gel show on gel
      • cell envelope (cell envelope: biosynthesis and degradation of murein sacculus and peptidoglycan)
      • expression plot for GlmM
      • SACOL2114 1 (2)
      • SACOL2114
      • aldehyde dehydrogenase
      • show on gel show on gel
      • fermentation (energy metabolism: fermentation)
      • regulation: SigB+
      • expression plot for SACOL2114 1
      • GltX
      • SACOL0574
      • glutamyl-tRNA synthetase
      • show on gel show on gel
      • translation (protein synthesis: trna aminoacylation)
      • expression plot for GltX
      • TrxB 2 (2)
      • SACOL0829
      • thioredoxin-disulfide reductase
      • show on gel show on gel
      • detoxification (energy metabolism: electron transport)
      • co-localization with: MvaD (H2O2, diamide, paraquat, NO, fermentation, NO3 resp., heat, puromycin, mupi.)
      • expression plot for TrxB 2
      • MvaD
      • SACOL0637
      • mevalonate diphosphate decarboxylase
      • show on gel show on gel
      • biosynthesis of cofactors, prosthetic groups, and carriers (biosynthesis of cofactors, prosthetic groups, and carriers: other)
      • co-localization with: TrxB 2 (H2O2, diamide, paraquat, NO, fermentation, NO3 resp., heat, puromycin, mupi.)
      • regulation: SigB+
      • expression plot for MvaD
      • SACOL1749
      • SACOL1749
      • NADP-dependent malic enzyme, putative
      • show on gel show on gel
      • pyruvate dehydrogenase and tca cyle (energy metabolism: tca cycle)
      • expression plot for SACOL1749
      • FabG1
      • SACOL1245
      • 3-oxoacyl-(acyl-carrier-protein) reductase
      • show on gel show on gel
      • fatty acid and phospholipid metabolism (fatty acid and phospholipid metabolism: biosynthesis)
      • regulation: FapR
      • expression plot for FabG1
       

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