Proteomic Signature Library for
Staphylococcus aureus COL
  • show
  • profiles
  • threshold (highlighter):
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      summary

      • modus:
      • pattern search
      • expression template:
      • SACOL0457
      • highlighter:
      • 2-fold change
      • sorting:
      • descending similarity to expression template (ascending Euclidean distance)
      • limit:
      • 10
       

      expression plots

      • y-axis:
      • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
      • x-axis:
      • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
      • experiments
      • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
      • color code
      • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
      • significnace:
      • asterisks (*) mark significant changes (details)
      • multiple spots:
      • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
      • protein overlap:
      • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
      • plot order:
      • descending similarity to expression template (ascending Euclidean distance)
       
      • SACOL0457
      • SACOL0457
      • conserved hypothetical protein
      • show on gel show on gel
      • unknown function or specifity (hypothetical proteins: conserved)
      • co-localization with: SACOL1768 (H2O2, paraquat, NO, fermentation, heat, puromycin)
      • regulation: SigB+
      • expression plot for SACOL0457
      • PdhC 1 (3)
      • SACOL1104
      • pyruvate dehydrogenase complex E2 component, dihydrolipoamide acetyltransferase
      • show on gel show on gel
      • pyruvate dehydrogenase and tca cyle (energy metabolism: pyruvate dehydrogenase)
      • expression plot for PdhC 1
      • SACOL1724
      • SACOL1724
      • MutT/nudix family protein
      • show on gel show on gel
      • dna metabolism (dna metabolism: dna replication, recombination, and repair)
      • expression plot for SACOL1724
      • SACOL0932
      • SACOL0932
      • D-isomer specific 2-hydroxyacid dehydrogenase family protein
      • show on gel show on gel
      • central intermediary metabolism (central intermediary metabolism: other)
      • expression plot for SACOL0932
      • FabZ
      • SACOL2091
      • beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
      • show on gel show on gel
      • fatty acid and phospholipid metabolism (fatty acid and phospholipid metabolism: biosynthesis)
      • regulation: SigB+
      • expression plot for FabZ
      • SACOL1952 3 (4)
      • SACOL1952
      • ferritins family protein
      • show on gel show on gel
      • transport (transport and binding proteins: cations and iron carrying compounds)
      • regulation: Fur, PerR
      • expression plot for SACOL1952 3
      • SACOL1555
      • SACOL1555
      • peptidase, M20/M25/M40 family
      • show on gel show on gel
      • protein fate (protein fate: degradation of proteins, peptides, and glycopeptides)
      • expression plot for SACOL1555
      • SACOL2053 2 (2)
      • SACOL2053
      • S1 RNA binding domain protein
      • show on gel show on gel
      • unknown function or specifity (unknown function: general)
      • expression plot for SACOL2053 2
      • SACOL1561
      • SACOL1561
      • 2-oxoisovalerate dehydrogenase, E1 component, beta subunit
      • show on gel show on gel
      • degradation of aminoacids (energy metabolism: amino acids and amines)
      • expression plot for SACOL1561
      • PurA
      • SACOL0018
      • adenylosuccinate synthetase
      • show on gel show on gel
      • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: purine ribonucleotide biosynthesis)
      • regulation: PurR
      • expression plot for PurA
       

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