Proteomic Signature Library for
Staphylococcus aureus COL
  • show
  • profiles
  • threshold (highlighter):
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      summary

      • modus:
      • pattern search
      • expression template:
      • RpsD 2
      • highlighter:
      • 2-fold change
      • sorting:
      • descending similarity to expression template (ascending Euclidean distance)
      • limit:
      • 10
       

      expression plots

      • y-axis:
      • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
      • x-axis:
      • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
      • experiments
      • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
      • color code
      • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
      • significnace:
      • asterisks (*) mark significant changes (details)
      • multiple spots:
      • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
      • protein overlap:
      • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
      • plot order:
      • descending similarity to expression template (ascending Euclidean distance)
       
      • RpsD 2 (2)
      • SACOL1769
      • ribosomal protein S4
      • show on gel show on gel
      • translation (protein synthesis: ribosomal proteins: synthesis and modification)
      • expression plot for RpsD 2
      • SACOL1772 2 (4)
      • SACOL1772
      • aminotransferase, class V
      • show on gel show on gel
      • unknown function or specifity (unknown function: enzymes of unknown specificity)
      • regulation: CodY
      • expression plot for SACOL1772 2
      • RplO
      • SACOL2220
      • ribosomal protein L15
      • show on gel show on gel
      • translation (protein synthesis: ribosomal proteins: synthesis and modification)
      • expression plot for RplO
      • SACOL2293
      • SACOL2293
      • NAD/NADP octopine/nopaline dehydrogenase family protein
      • show on gel show on gel
      • unknown function or specifity (unknown function: enzymes of unknown specificity)
      • regulation: SigB+
      • expression plot for SACOL2293
      • Cap5P
      • SACOL0151
      • UDP-N-acetylglucosamine 2-epimerase Cap5P
      • show on gel show on gel
      • cell envelope (cell envelope: biosynthesis and degradation of surface polysaccharides and lipopolysaccharides)
      • regulation: CodY, SigB+
      • expression plot for Cap5P
      • SACOL1670
      • SACOL1670
      • conserved hypothetical protein
      • show on gel show on gel
      • unknown function or specifity (hypothetical proteins: conserved)
      • co-localization with: SACOL1387 (NO3 resp.)
      • expression plot for SACOL1670
      • RsbW 2 (2)
      • SACOL2055
      • anti-sigma B factor
      • show on gel show on gel
      • regulation (cellular processes: adaptations to atypical conditions)
      • regulation: SigB+
      • expression plot for RsbW 2
      • SACOL1503 1 (2)
      • SACOL1503
      • TPR domain protein
      • show on gel show on gel
      • unknown function or specifity (unknown function: general)
      • regulation: CodY
      • expression plot for SACOL1503 1
      • SACOL1503 2 (2)
      • SACOL1503
      • TPR domain protein
      • show on gel show on gel
      • unknown function or specifity (unknown function: general)
      • regulation: CodY
      • expression plot for SACOL1503 2
      • RplD
      • SACOL2238
      • ribosomal protein L4
      • show on gel show on gel
      • translation (protein synthesis: ribosomal proteins: synthesis and modification)
      • expression plot for RplD
       

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