Proteomic Signature Library for
Staphylococcus aureus COL
  • show
  • profiles
  • threshold (highlighter):
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      summary

      • modus:
      • pattern search
      • expression template:
      • PyrC
      • highlighter:
      • 2-fold change
      • sorting:
      • descending similarity to expression template (ascending Euclidean distance)
      • limit:
      • 10
       

      expression plots

      • y-axis:
      • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
      • x-axis:
      • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
      • experiments
      • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
      • color code
      • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
      • significnace:
      • asterisks (*) mark significant changes (details)
      • multiple spots:
      • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
      • protein overlap:
      • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
      • plot order:
      • descending similarity to expression template (ascending Euclidean distance)
       
      • PyrC
      • SACOL1213
      • dihydroorotase
      • show on gel show on gel
      • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: pyrimidine ribonucleotide biosynthesis)
      • co-localization with: FabF (diamide, paraquat, NO, fermentation, NO3 resp., heat, puromycin, mupi.)
      • regulation: PyrR
      • expression plot for PyrC
      • FabF
      • SACOL0988
      • 3-oxoacyl-(acyl-carrier-protein) synthase II
      • show on gel show on gel
      • fatty acid and phospholipid metabolism (fatty acid and phospholipid metabolism: biosynthesis)
      • co-localization with: PyrC (diamide, paraquat, NO, fermentation, NO3 resp., heat, puromycin, mupi.)
      • regulation: FapR
      • expression plot for FabF
      • QueA
      • SACOL1695
      • S-adenosylmethionine:tRNA ribosyltransferase-isomerase
      • show on gel show on gel
      • translation (protein synthesis: trna and rrna base modification)
      • expression plot for QueA
      • PurF 1 (2)
      • SACOL1079
      • amidophosphoribosyltransferase
      • show on gel show on gel
      • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: purine ribonucleotide biosynthesis)
      • regulation: PurR
      • expression plot for PurF 1
      • GidA
      • SACOL2737
      • glucose inhibited division protein A
      • show on gel show on gel
      • cell division (unknown function: general)
      • expression plot for GidA
      • SACOL1677
      • SACOL1677
      • aminotransferase, class V
      • show on gel show on gel
      • unknown function or specifity (unknown function: enzymes of unknown specificity)
      • expression plot for SACOL1677
      • PurD
      • SACOL1083
      • phosphoribosylamine--glycine ligase
      • show on gel show on gel
      • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: purine ribonucleotide biosynthesis)
      • regulation: PurR
      • expression plot for PurD
      • TrmU
      • SACOL1676
      • tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
      • show on gel show on gel
      • translation (protein synthesis: trna and rrna base modification)
      • expression plot for TrmU
      • GlmM
      • SACOL2151
      • phosphoglucosamine mutase GlmM
      • show on gel show on gel
      • cell envelope (cell envelope: biosynthesis and degradation of murein sacculus and peptidoglycan)
      • expression plot for GlmM
      • SACOL0556
      • SACOL0556
      • chaperonin, 33 kDa
      • show on gel show on gel
      • protein fate (protein fate: protein folding and stabilization)
      • expression plot for SACOL0556
       

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