Proteomic Signature Library for
Staphylococcus aureus COL
  • show
  • profiles
  • threshold (highlighter):
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      summary

      • modus:
      • pattern search
      • expression template:
      • Pgm 3
      • highlighter:
      • 2-fold change
      • sorting:
      • descending similarity to expression template (ascending Euclidean distance)
      • limit:
      • 10
       

      expression plots

      • y-axis:
      • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
      • x-axis:
      • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
      • experiments
      • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
      • color code
      • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
      • significnace:
      • asterisks (*) mark significant changes (details)
      • multiple spots:
      • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
      • protein overlap:
      • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
      • plot order:
      • descending similarity to expression template (ascending Euclidean distance)
       
      • Pgm 3 (4)
      • SACOL0841
      • phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent
      • show on gel show on gel
      • glycolysis/gluconeogenesis (energy metabolism: glycolysis/gluconeogenesis)
      • regulation: GapR
      • expression plot for Pgm 3
      • TpiA 2 (2)
      • SACOL0840
      • triosephosphate isomerase
      • show on gel show on gel
      • glycolysis/gluconeogenesis (energy metabolism: glycolysis/gluconeogenesis)
      • co-localization with: Adk (H2O2, fermentation), TpiA 1 (H2O2, fermentation)
      • regulation: GapR
      • expression plot for TpiA 2
      • Eno 2 (5)
      • SACOL0842
      • enolase
      • show on gel show on gel
      • glycolysis/gluconeogenesis (energy metabolism: glycolysis/gluconeogenesis)
      • co-localization with: Eno 3 (paraquat)
      • regulation: GapR
      • expression plot for Eno 2
      • GapA1 2 (3)
      • SACOL0838
      • glyceraldehyde 3-phosphate dehydrogenase
      • show on gel show on gel
      • glycolysis/gluconeogenesis (energy metabolism: glycolysis/gluconeogenesis)
      • regulation: GapR
      • expression plot for GapA1 2
      • Eno 1 (5)
      • SACOL0842
      • enolase
      • show on gel show on gel
      • glycolysis/gluconeogenesis (energy metabolism: glycolysis/gluconeogenesis)
      • co-localization with: Eno 3 (NO, fermentation, NO3 resp., mupi.), Eno 4 (fermentation)
      • regulation: GapR
      • expression plot for Eno 1
      • GlmS 2 (2)
      • SACOL2145
      • glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
      • show on gel show on gel
      • central intermediary metabolism (central intermediary metabolism: amino sugars)
      • regulation: GlmS
      • expression plot for GlmS 2
      • GlmS 1 (2)
      • SACOL2145
      • glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
      • show on gel show on gel
      • central intermediary metabolism (central intermediary metabolism: amino sugars)
      • regulation: GlmS
      • expression plot for GlmS 1
      • Pgk 5 (5)
      • SACOL0839
      • phosphoglycerate kinase
      • show on gel show on gel
      • glycolysis/gluconeogenesis (energy metabolism: glycolysis/gluconeogenesis)
      • regulation: GapR
      • expression plot for Pgk 5
      • SACOL2596
      • SACOL2596
      • conserved hypothetical protein
      • show on gel show on gel
      • unknown function or specifity (hypothetical proteins: conserved)
      • regulation: SigB+
      • expression plot for SACOL2596
      • Tsf 1 (2)
      • SACOL1276
      • translation elongation factor Ts
      • show on gel show on gel
      • translation (protein synthesis: translation factors)
      • co-localization with: Ldh1 2 (fermentation)
      • expression plot for Tsf 1
       

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