Proteomic Signature Library for
Staphylococcus aureus COL
  • show
  • profiles
  • threshold (highlighter):
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      summary

      • modus:
      • pattern search
      • expression template:
      • Pgk 3
      • highlighter:
      • 2-fold change
      • sorting:
      • descending similarity to expression template (ascending Euclidean distance)
      • limit:
      • 10
       

      expression plots

      • y-axis:
      • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
      • x-axis:
      • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
      • experiments
      • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
      • color code
      • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
      • significnace:
      • asterisks (*) mark significant changes (details)
      • multiple spots:
      • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
      • protein overlap:
      • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
      • plot order:
      • descending similarity to expression template (ascending Euclidean distance)
       
      • Pgk 3 (5)
      • SACOL0839
      • phosphoglycerate kinase
      • show on gel show on gel
      • glycolysis/gluconeogenesis (energy metabolism: glycolysis/gluconeogenesis)
      • co-localization with: Pgk 2 (H2O2, diamide, paraquat, mupi.)
      • regulation: GapR
      • expression plot for Pgk 3
      • SACOL1441
      • SACOL1441
      • tellurite resistance protein, putative
      • show on gel show on gel
      • virulence (cellular processes: toxin production and resistance)
      • expression plot for SACOL1441
      • SACOL0656
      • SACOL0656
      • conserved hypothetical protein
      • show on gel show on gel
      • unknown function or specifity (hypothetical proteins: conserved)
      • expression plot for SACOL0656
      • Zwf 2 (2)
      • SACOL1549
      • glucose-6-phosphate 1-dehydrogenase
      • show on gel show on gel
      • pentose phosphate pathway (energy metabolism: pentose phosphate pathway)
      • co-localization with: SdhA (H2O2), KatA 3 (H2O2, paraquat)
      • expression plot for Zwf 2
      • Gnd
      • SACOL1554
      • 6-phosphogluconate dehydrogenase, decarboxylating
      • show on gel show on gel
      • pentose phosphate pathway (energy metabolism: pentose phosphate pathway)
      • expression plot for Gnd
      • Zwf 1 (2)
      • SACOL1549
      • glucose-6-phosphate 1-dehydrogenase
      • show on gel show on gel
      • pentose phosphate pathway (energy metabolism: pentose phosphate pathway)
      • co-localization with: SerA 2 (paraquat), KatA 2 (paraquat)
      • expression plot for Zwf 1
      • SACOL1751
      • SACOL1751
      • DHH subfamily 1 protein
      • show on gel show on gel
      • unknown function or specifity (unknown function: general)
      • expression plot for SACOL1751
      • SACOL1445
      • SACOL1445
      • CbbQ/NirQ/NorQ/GpvN family protein
      • show on gel show on gel
      • unknown function or specifity (unknown function: general)
      • expression plot for SACOL1445
      • AhpF
      • SACOL0451
      • alkyl hydroperoxide reductase, subunit F
      • show on gel show on gel
      • detoxification (cellular processes: detoxification)
      • regulation: PerR
      • expression plot for AhpF
      • PolA
      • SACOL1737
      • DNA polymerase I
      • show on gel show on gel
      • dna metabolism (dna metabolism: dna replication, recombination, and repair)
      • co-localization with: AlaS (H2O2, diamide, paraquat, NO, fermentation, NO3 resp., heat, mupi.)
      • expression plot for PolA
       

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