Proteomic Signature Library for
Staphylococcus aureus COL
  • show
  • profiles
  • threshold (highlighter):
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      summary

      • modus:
      • pattern search
      • expression template:
      • PdhA 2
      • highlighter:
      • 2-fold change
      • sorting:
      • descending similarity to expression template (ascending Euclidean distance)
      • limit:
      • 10
       

      expression plots

      • y-axis:
      • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
      • x-axis:
      • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
      • experiments
      • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
      • color code
      • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
      • significnace:
      • asterisks (*) mark significant changes (details)
      • multiple spots:
      • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
      • protein overlap:
      • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
      • plot order:
      • descending similarity to expression template (ascending Euclidean distance)
       
      • PdhA 2 (2)
      • SACOL1102
      • pyruvate dehydrogenase complex E1 component, alpha subunit
      • show on gel show on gel
      • pyruvate dehydrogenase and tca cyle (energy metabolism: pyruvate dehydrogenase)
      • expression plot for PdhA 2
      • SACOL1285
      • SACOL1285
      • N utilization substance protein A, putative
      • show on gel show on gel
      • transcription (transcription: transcription factors)
      • expression plot for SACOL1285
      • Asd
      • SACOL1429
      • aspartate-semialdehyde dehydrogenase
      • show on gel show on gel
      • amino acid biosynthesis (amino acid biosynthesis: aspartate family)
      • regulation: CodY, Lysine
      • expression plot for Asd
      • SACOL2321 1 (2)
      • SACOL2321
      • oxidoreductase, short chain dehydrogenase/reductase family
      • show on gel show on gel
      • electron transport (unknown function: enzymes of unknown specificity)
      • regulation: SigB+
      • expression plot for SACOL2321 1
      • PdhA 1 (2)
      • SACOL1102
      • pyruvate dehydrogenase complex E1 component, alpha subunit
      • show on gel show on gel
      • pyruvate dehydrogenase and tca cyle (energy metabolism: pyruvate dehydrogenase)
      • expression plot for PdhA 1
      • FolD
      • SACOL1072
      • methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase
      • show on gel show on gel
      • biosynthesis of cofactors, prosthetic groups, and carriers (biosynthesis of cofactors, prosthetic groups, and carriers: folic acid)
      • regulation: PurR
      • expression plot for FolD
      • Eno 2 (5)
      • SACOL0842
      • enolase
      • show on gel show on gel
      • glycolysis/gluconeogenesis (energy metabolism: glycolysis/gluconeogenesis)
      • co-localization with: Eno 3 (paraquat)
      • regulation: GapR
      • expression plot for Eno 2
      • Tkt 2 (2)
      • SACOL1377
      • transketolase
      • show on gel show on gel
      • pentose phosphate pathway (energy metabolism: pentose phosphate pathway)
      • co-localization with: Tkt 1 (fermentation)
      • expression plot for Tkt 2
      • CysS
      • SACOL0576
      • cysteinyl-tRNA synthetase
      • show on gel show on gel
      • translation (protein synthesis: trna aminoacylation)
      • regulation: T-box(Cys)
      • expression plot for CysS
      • SACOL1912 2 (3)
      • SACOL1912
      • glucosamine-6-phosphate isomerase, putative
      • show on gel show on gel
      • central intermediary metabolism (central intermediary metabolism: amino sugars)
      • regulation: SigB+
      • expression plot for SACOL1912 2
       

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