Proteomic Signature Library for
Staphylococcus aureus COL
  • show
  • profiles
  • threshold (highlighter):
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      summary

      • modus:
      • pattern search
      • expression template:
      • NrdF 2
      • highlighter:
      • 2-fold change
      • sorting:
      • descending similarity to expression template (ascending Euclidean distance)
      • limit:
      • 10
       

      expression plots

      • y-axis:
      • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
      • x-axis:
      • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
      • experiments
      • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
      • color code
      • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
      • significnace:
      • asterisks (*) mark significant changes (details)
      • multiple spots:
      • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
      • protein overlap:
      • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
      • plot order:
      • descending similarity to expression template (ascending Euclidean distance)
       
      • NrdF 2 (2)
      • SACOL0793
      • ribonucleoside-diphosphate reductase 2, beta subunit
      • show on gel show on gel
      • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: 2'-deoxyribonucleotide metabolism)
      • regulation: NrdR
      • expression plot for NrdF 2
      • NrdF 1 (2)
      • SACOL0793
      • ribonucleoside-diphosphate reductase 2, beta subunit
      • show on gel show on gel
      • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: 2'-deoxyribonucleotide metabolism)
      • regulation: NrdR
      • expression plot for NrdF 1
      • SACOL2519 1 (2)
      • SACOL2519
      • conserved hypothetical protein
      • show on gel show on gel
      • unknown function or specifity (hypothetical proteins: conserved)
      • regulation: SigB+
      • expression plot for SACOL2519 1
      • Udk
      • SACOL1666
      • uridine kinase
      • show on gel show on gel
      • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: salvage of nucleosides and nucleotides)
      • expression plot for Udk
      • FbaA 4 (4)
      • SACOL2117
      • fructose-bisphosphate aldolase, class II
      • show on gel show on gel
      • glycolysis/gluconeogenesis (energy metabolism: glycolysis/gluconeogenesis)
      • regulation: CcpA
      • expression plot for FbaA 4
      • GalM
      • SACOL2332
      • aldose 1-epimerase
      • show on gel show on gel
      • degradation of sugars (energy metabolism: sugars)
      • expression plot for GalM
      • GuaA 2 (2)
      • SACOL0461
      • GMP synthase
      • show on gel show on gel
      • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: purine ribonucleotide biosynthesis)
      • regulation: Purine
      • expression plot for GuaA 2
      • SACOL1649
      • SACOL1649
      • conserved hypothetical protein TIGR00488
      • show on gel show on gel
      • unknown function or specifity (hypothetical proteins: conserved)
      • expression plot for SACOL1649
      • SACOL1749
      • SACOL1749
      • NADP-dependent malic enzyme, putative
      • show on gel show on gel
      • pyruvate dehydrogenase and tca cyle (energy metabolism: tca cycle)
      • expression plot for SACOL1749
      • SACOL0603
      • SACOL0603
      • deoxynucleoside kinase family protein
      • show on gel show on gel
      • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: nucleotide and nucleoside interconversions)
      • expression plot for SACOL0603
       

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