Proteomic Signature Library for
Staphylococcus aureus COL
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  • profiles
  • threshold (highlighter):
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      summary

      • modus:
      • pattern search
      • expression template:
      • Icd 2
      • highlighter:
      • 2-fold change
      • sorting:
      • descending similarity to expression template (ascending Euclidean distance)
      • limit:
      • 10
       

      expression plots

      • y-axis:
      • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
      • x-axis:
      • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
      • experiments
      • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
      • color code
      • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
      • significnace:
      • asterisks (*) mark significant changes (details)
      • multiple spots:
      • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
      • protein overlap:
      • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
      • plot order:
      • descending similarity to expression template (ascending Euclidean distance)
       
      • Icd 2 (2)
      • SACOL1741
      • isocitrate dehydrogenase, NADP-dependent
      • show on gel show on gel
      • pyruvate dehydrogenase and tca cyle (energy metabolism: tca cycle)
      • regulation: CcpA
      • expression plot for Icd 2
      • Icd 1 (2)
      • SACOL1741
      • isocitrate dehydrogenase, NADP-dependent
      • show on gel show on gel
      • pyruvate dehydrogenase and tca cyle (energy metabolism: tca cycle)
      • regulation: CcpA
      • expression plot for Icd 1
      • SACOL0111 1 (2)
      • SACOL0111
      • acetoin reductase
      • show on gel show on gel
      • fermentation (energy metabolism: fermentation)
      • regulation: CodY
      • expression plot for SACOL0111 1
      • SACOL0467
      • SACOL0467
      • conserved hypothetical protein
      • show on gel show on gel
      • unknown function or specifity (hypothetical proteins: conserved)
      • expression plot for SACOL0467
      • PfkA 3 (3)
      • SACOL1746
      • 6-phosphofructokinase
      • show on gel show on gel
      • glycolysis/gluconeogenesis (energy metabolism: glycolysis/gluconeogenesis)
      • regulation: CcpA
      • expression plot for PfkA 3
      • SodA2 1 (2)
      • SACOL1610
      • superoxide dismutase
      • show on gel show on gel
      • detoxification (cellular processes: detoxification)
      • co-localization with: PyrE (paraquat, fermentation)
      • regulation: CodY
      • expression plot for SodA2 1
      • SACOL0731
      • SACOL0731
      • transcriptional regulator, LysR family
      • show on gel show on gel
      • regulation (regulatory functions: dna interactions)
      • co-localization with: SACOL2196 (H2O2, diamide, paraquat, NO, fermentation, NO3 resp., puromycin)
      • expression plot for SACOL0731
      • CoaE
      • SACOL1735
      • dephospho-CoA kinase
      • show on gel show on gel
      • biosynthesis of cofactors, prosthetic groups, and carriers (biosynthesis of cofactors, prosthetic groups, and carriers: pantothenate and coenzyme a)
      • expression plot for CoaE
      • FbaA 2 (4)
      • SACOL2117
      • fructose-bisphosphate aldolase, class II
      • show on gel show on gel
      • glycolysis/gluconeogenesis (energy metabolism: glycolysis/gluconeogenesis)
      • co-localization with: AccA 2 (H2O2, fermentation)
      • regulation: CcpA
      • expression plot for FbaA 2
      • HslU 2 (2)
      • SACOL1271
      • heat shock protein HslVU, ATPase subunit HslU
      • show on gel show on gel
      • protein fate (protein fate: protein folding and stabilization)
      • expression plot for HslU 2
       

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