Proteomic Signature Library for
Staphylococcus aureus COL
  • show
  • profiles
  • threshold (highlighter):
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      summary

      • modus:
      • pattern search
      • expression template:
      • GalM
      • highlighter:
      • 2-fold change
      • sorting:
      • descending similarity to expression template (ascending Euclidean distance)
      • limit:
      • 10
       

      expression plots

      • y-axis:
      • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
      • x-axis:
      • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
      • experiments
      • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
      • color code
      • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
      • significnace:
      • asterisks (*) mark significant changes (details)
      • multiple spots:
      • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
      • protein overlap:
      • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
      • plot order:
      • descending similarity to expression template (ascending Euclidean distance)
       
      • GalM
      • SACOL2332
      • aldose 1-epimerase
      • show on gel show on gel
      • degradation of sugars (energy metabolism: sugars)
      • expression plot for GalM
      • CodY 1 (2)
      • SACOL1272
      • transcriptional regulator CodY
      • show on gel show on gel
      • regulation (regulatory functions: dna interactions)
      • expression plot for CodY 1
      • MetK 2 (2)
      • SACOL1837
      • S-adenosylmethionine synthetase
      • show on gel show on gel
      • central intermediary metabolism (central intermediary metabolism: one-carbon metabolism)
      • co-localization with: PrfA (H2O2, diamide, fermentation)
      • regulation: SAM
      • expression plot for MetK 2
      • SACOL1627
      • SACOL1627
      • conserved hypothetical protein TIGR00043
      • show on gel show on gel
      • unknown function or specifity (hypothetical proteins: conserved)
      • expression plot for SACOL1627
      • Hom
      • SACOL1362
      • homoserine dehydrogenase
      • show on gel show on gel
      • amino acid biosynthesis (amino acid biosynthesis: aspartate family)
      • co-localization with: SufD 3 (H2O2)
      • regulation: CodY
      • expression plot for Hom
      • GuaC
      • SACOL1371
      • GMP reductase
      • show on gel show on gel
      • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: nucleotide and nucleoside interconversions)
      • expression plot for GuaC
      • RsbU
      • SACOL2057
      • sigma factor B regulator protein
      • show on gel show on gel
      • regulation (regulatory functions: protein interactions)
      • co-localization with: ThyA (H2O2), HutG (puromycin)
      • expression plot for RsbU
      • SACOL1402
      • SACOL1402
      • glutamyl aminopeptidase, putative
      • show on gel show on gel
      • protein fate (hypothetical proteins: conserved)
      • co-localization with: NadE (H2O2, NO)
      • expression plot for SACOL1402
      • Ssb2
      • SACOL0438
      • single-stranded DNA-binding protein
      • show on gel show on gel
      • dna metabolism (dna metabolism: dna replication, recombination, and repair)
      • co-localization with: SACOL2519 2 (paraquat)
      • expression plot for Ssb2
      • AccA 1 (2)
      • SACOL1747
      • acetyl-CoA carboxylase, carboxyl transferase, alpha subunit
      • show on gel show on gel
      • fatty acid and phospholipid metabolism (fatty acid and phospholipid metabolism: biosynthesis)
      • expression plot for AccA 1
       

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