Proteomic Signature Library for
Staphylococcus aureus COL
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  • profiles
  • threshold (highlighter):
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      summary

      • modus:
      • pattern search
      • expression template:
      • FabI 3
      • highlighter:
      • 2-fold change
      • sorting:
      • descending similarity to expression template (ascending Euclidean distance)
      • limit:
      • 10
       

      expression plots

      • y-axis:
      • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
      • x-axis:
      • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
      • experiments
      • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
      • color code
      • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
      • significnace:
      • asterisks (*) mark significant changes (details)
      • multiple spots:
      • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
      • protein overlap:
      • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
      • plot order:
      • descending similarity to expression template (ascending Euclidean distance)
       
      • FabI 3 (3)
      • SACOL1016
      • enoyl-(acyl-carrier-protein) reductase
      • show on gel show on gel
      • fatty acid and phospholipid metabolism (fatty acid and phospholipid metabolism: biosynthesis)
      • regulation: FapR
      • expression plot for FabI 3
      • SACOL0427 1 (2)
      • SACOL0427
      • conserved hypothetical protein
      • show on gel show on gel
      • unknown function or specifity (hypothetical proteins: conserved)
      • co-localization with: YycF (paraquat)
      • regulation: CodY, T-box(Met)
      • expression plot for SACOL0427 1
      • IlvC 2 (4)
      • SACOL2045
      • ketol-acid reductoisomerase
      • show on gel show on gel
      • amino acid biosynthesis (amino acid biosynthesis: pyruvate family)
      • co-localization with: SACOL1562 1 (H2O2)
      • regulation: CodY
      • expression plot for IlvC 2
      • FabI 2 (3)
      • SACOL1016
      • enoyl-(acyl-carrier-protein) reductase
      • show on gel show on gel
      • fatty acid and phospholipid metabolism (fatty acid and phospholipid metabolism: biosynthesis)
      • regulation: FapR
      • expression plot for FabI 2
      • AckA 2 (2)
      • SACOL1760
      • acetate kinase
      • show on gel show on gel
      • fermentation (central intermediary metabolism: other)
      • expression plot for AckA 2
      • RibF
      • SACOL1291
      • riboflavin biosynthesis protein RibF
      • show on gel show on gel
      • biosynthesis of cofactors, prosthetic groups, and carriers (biosynthesis of cofactors, prosthetic groups, and carriers: riboflavin, fmn, and fad)
      • co-localization with: SACOL1192 (H2O2, diamide, paraquat, fermentation, puromycin, mupi.)
      • expression plot for RibF
      • Udk
      • SACOL1666
      • uridine kinase
      • show on gel show on gel
      • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: salvage of nucleosides and nucleotides)
      • expression plot for Udk
      • SACOL1936
      • SACOL1936
      • cytosolic long-chain acyl-CoA thioester hydrolase family protein
      • show on gel show on gel
      • fatty acid and phospholipid metabolism (fatty acid and phospholipid metabolism: degradation)
      • expression plot for SACOL1936
      • SACOL1192
      • SACOL1192
      • S-adenosyl-methyltransferase MraW
      • show on gel show on gel
      • unknown function or specifity (unknown function: enzymes of unknown specificity)
      • co-localization with: RibF (H2O2, diamide, paraquat, fermentation, puromycin, mupi.)
      • expression plot for SACOL1192
      • PlsX
      • SACOL1243
      • fatty acid/phospholipid synthesis protein PlsX
      • show on gel show on gel
      • fatty acid and phospholipid metabolism (fatty acid and phospholipid metabolism: biosynthesis)
      • regulation: FapR
      • expression plot for PlsX
       

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