Proteomic Signature Library for
Staphylococcus aureus COL
  • show
  • profiles
  • threshold (highlighter):
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      summary

      • modus:
      • pattern search
      • expression template:
      • Eno 4
      • highlighter:
      • 2-fold change
      • sorting:
      • descending similarity to expression template (ascending Euclidean distance)
      • limit:
      • 10
       

      expression plots

      • y-axis:
      • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
      • x-axis:
      • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
      • experiments
      • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
      • color code
      • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
      • significnace:
      • asterisks (*) mark significant changes (details)
      • multiple spots:
      • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
      • protein overlap:
      • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
      • plot order:
      • descending similarity to expression template (ascending Euclidean distance)
       
      • Eno 4 (5)
      • SACOL0842
      • enolase
      • show on gel show on gel
      • glycolysis/gluconeogenesis (energy metabolism: glycolysis/gluconeogenesis)
      • co-localization with: Eno 1 (fermentation), Eno 3 (fermentation)
      • regulation: GapR
      • expression plot for Eno 4
      • PflB 5 (7)
      • SACOL0204
      • formate acetyltransferase
      • show on gel show on gel
      • fermentation (energy metabolism: anaerobic)
      • regulation: CcpA, Rex
      • expression plot for PflB 5
      • SACOL2535 2 (2)
      • SACOL2535
      • D-isomer specific 2-hydroxyacid dehydrogenase family protein
      • show on gel show on gel
      • central intermediary metabolism (central intermediary metabolism: other)
      • regulation: Rex
      • expression plot for SACOL2535 2
      • Ldh1 2 (2)
      • SACOL0222
      • L-lactate dehydrogenase
      • show on gel show on gel
      • fermentation (energy metabolism: anaerobic)
      • co-localization with: Tsf 1 (fermentation)
      • regulation: Rex
      • expression plot for Ldh1 2
      • Hmp
      • SACOL0220
      • flavohemoprotein, putative
      • show on gel show on gel
      • detoxification (unknown function: general)
      • co-localization with: IlvA2 3 (H2O2, diamide, paraquat, NO, fermentation, NO3 resp., heat, puromycin), SufD 4 (paraquat, fermentation, NO3 resp., heat, puromycin)
      • expression plot for Hmp
      • IlvA2 3 (3)
      • SACOL2050
      • threonine dehydratase
      • show on gel show on gel
      • amino acid biosynthesis (amino acid biosynthesis: pyruvate family)
      • co-localization with: Hmp (H2O2, diamide, paraquat, NO, fermentation, NO3 resp., heat, puromycin), SufD 4 (paraquat, fermentation, NO3 resp., heat, puromycin)
      • regulation: CodY
      • expression plot for IlvA2 3
      • SufD 4 (4)
      • SACOL0915
      • FeS assembly protein SufD
      • show on gel show on gel
      • biosynthesis of cofactors, prosthetic groups, and carriers (biosynthesis of cofactors, prosthetic groups, and carriers: other)
      • co-localization with: IlvA2 3 (paraquat, fermentation, NO3 resp., heat, puromycin)
      • regulation: PerR
      • expression plot for SufD 4
      • PflB 3 (7)
      • SACOL0204
      • formate acetyltransferase
      • show on gel show on gel
      • fermentation (energy metabolism: anaerobic)
      • co-localization with: PflB 4 (NO3 resp.)
      • regulation: CcpA, Rex
      • expression plot for PflB 3
      • Pgk 1 (5)
      • SACOL0839
      • phosphoglycerate kinase
      • show on gel show on gel
      • glycolysis/gluconeogenesis (energy metabolism: glycolysis/gluconeogenesis)
      • co-localization with: Pgk 4 (H2O2, paraquat, NO, puromycin)
      • regulation: GapR
      • expression plot for Pgk 1
      • Pgk 4 (5)
      • SACOL0839
      • phosphoglycerate kinase
      • show on gel show on gel
      • glycolysis/gluconeogenesis (energy metabolism: glycolysis/gluconeogenesis)
      • co-localization with: Pgk 1 (H2O2, paraquat, NO, puromycin)
      • regulation: GapR
      • expression plot for Pgk 4
       

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