Proteomic Signature Library for
Staphylococcus aureus COL
  • show
  • profiles
  • threshold (highlighter):
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      summary

      • modus:
      • pattern search
      • expression template:
      • AtpA 2
      • highlighter:
      • 2-fold change
      • sorting:
      • descending similarity to expression template (ascending Euclidean distance)
      • limit:
      • 10
       

      expression plots

      • y-axis:
      • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
      • x-axis:
      • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
      • experiments
      • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
      • color code
      • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
      • significnace:
      • asterisks (*) mark significant changes (details)
      • multiple spots:
      • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
      • protein overlap:
      • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
      • plot order:
      • descending similarity to expression template (ascending Euclidean distance)
       
      • AtpA 2 (2)
      • SACOL2097
      • ATP synthase F1, alpha subunit
      • show on gel show on gel
      • electron transport (energy metabolism: atp-proton motive force interconversion)
      • expression plot for AtpA 2
      • TypA
      • SACOL1118
      • GTP-binding protein TypA
      • show on gel show on gel
      • unknown function or specifity (unknown function: general)
      • expression plot for TypA
      • PepS 1 (2)
      • SACOL1937
      • aminopeptidase PepS
      • show on gel show on gel
      • protein fate (protein fate: degradation of proteins, peptides, and glycopeptides)
      • expression plot for PepS 1
      • RpsD 1 (2)
      • SACOL1769
      • ribosomal protein S4
      • show on gel show on gel
      • translation (protein synthesis: ribosomal proteins: synthesis and modification)
      • expression plot for RpsD 1
      • RpoA
      • SACOL2213
      • DNA-directed RNA polymerase, alpha subunit
      • show on gel show on gel
      • transcription (transcription: dna-dependent rna polymerase)
      • expression plot for RpoA
      • SACOL1749
      • SACOL1749
      • NADP-dependent malic enzyme, putative
      • show on gel show on gel
      • pyruvate dehydrogenase and tca cyle (energy metabolism: tca cycle)
      • expression plot for SACOL1749
      • GltX
      • SACOL0574
      • glutamyl-tRNA synthetase
      • show on gel show on gel
      • translation (protein synthesis: trna aminoacylation)
      • expression plot for GltX
      • Tuf 2 (8)
      • SACOL0594
      • translation elongation factor Tu
      • show on gel show on gel
      • translation (protein synthesis: translation factors)
      • expression plot for Tuf 2
      • MvaD
      • SACOL0637
      • mevalonate diphosphate decarboxylase
      • show on gel show on gel
      • biosynthesis of cofactors, prosthetic groups, and carriers (biosynthesis of cofactors, prosthetic groups, and carriers: other)
      • co-localization with: TrxB 2 (H2O2, diamide, paraquat, NO, fermentation, NO3 resp., heat, puromycin, mupi.)
      • regulation: SigB+
      • expression plot for MvaD
      • TrxB 2 (2)
      • SACOL0829
      • thioredoxin-disulfide reductase
      • show on gel show on gel
      • detoxification (energy metabolism: electron transport)
      • co-localization with: MvaD (H2O2, diamide, paraquat, NO, fermentation, NO3 resp., heat, puromycin, mupi.)
      • expression plot for TrxB 2
       

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