Proteomic Signature Library for
Staphylococcus aureus COL
  • show
  • profiles
  • threshold (highlighter):
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      summary

      • modus:
      • pattern search
      • expression template:
      • Asp23 1
      • highlighter:
      • 2-fold change
      • sorting:
      • descending similarity to expression template (ascending Euclidean distance)
      • limit:
      • 10
       

      expression plots

      • y-axis:
      • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
      • x-axis:
      • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
      • experiments
      • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
      • color code
      • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
      • significnace:
      • asterisks (*) mark significant changes (details)
      • multiple spots:
      • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
      • protein overlap:
      • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
      • plot order:
      • descending similarity to expression template (ascending Euclidean distance)
       
      • Asp23 1 (6)
      • SACOL2173
      • alkaline shock protein 23
      • show on gel show on gel
      • stress response (cellular processes: adaptations to atypical conditions)
      • regulation: SigB+
      • expression plot for Asp23 1
      • GuaB 1 (2)
      • SACOL0460
      • inosine-5-monophosphate dehydrogenase
      • show on gel show on gel
      • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: purine ribonucleotide biosynthesis)
      • regulation: Purine
      • expression plot for GuaB 1
      • SACOL0879
      • SACOL0879
      • conserved hypothetical protein
      • show on gel show on gel
      • unknown function or specifity (hypothetical proteins: conserved)
      • expression plot for SACOL0879
      • MurD
      • SACOL1196
      • UDP-N-acetylmuramoylalanine--D-glutamate ligase
      • show on gel show on gel
      • cell envelope (cell envelope: biosynthesis and degradation of murein sacculus and peptidoglycan)
      • expression plot for MurD
      • SACOL1003
      • SACOL1003
      • negative regulator of competence MecA, putative
      • show on gel show on gel
      • regulation (cellular processes: dna transformation)
      • expression plot for SACOL1003
      • RibH
      • SACOL1817
      • 6,7-dimethyl-8-ribityllumazine synthase
      • show on gel show on gel
      • biosynthesis of cofactors, prosthetic groups, and carriers (biosynthesis of cofactors, prosthetic groups, and carriers: riboflavin, fmn, and fad)
      • regulation: FMN
      • expression plot for RibH
      • SACOL1931
      • SACOL1931
      • FAD-binding RecX family protein
      • show on gel show on gel
      • dna metabolism (dna metabolism: dna replication, recombination, and repair)
      • co-localization with: PrsA 4 (H2O2, diamide, paraquat, fermentation, heat, mupi.)
      • expression plot for SACOL1931
      • PrsA 4 (4)
      • SACOL0544
      • ribose-phosphate pyrophosphokinase
      • show on gel show on gel
      • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: purine ribonucleotide biosynthesis)
      • co-localization with: SACOL1931 (H2O2, diamide, paraquat, fermentation, heat, mupi.)
      • expression plot for PrsA 4
      • SACOL0157
      • SACOL0157
      • conserved hypothetical protein
      • show on gel show on gel
      • unknown function or specifity (hypothetical proteins: conserved)
      • regulation: CodY, CymR
      • expression plot for SACOL0157
      • SACOL1520
      • SACOL1520
      • pyridine nucleotide-disulfide oxidoreductase
      • show on gel show on gel
      • electron transport (unknown function: enzymes of unknown specificity)
      • expression plot for SACOL1520
       

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