Proteomic Signature Library for
Staphylococcus aureus COL

summary

  • modus:
  • browse modus (regulation filter)
  • selected regulators/regulatory elements:
  • PyrR
  • threshold filter:
  • 2-fold change
  • matching:
  • 6 expression profiles
  • sorting:
  • based on function (1st) and locus (2nd)
 

expression plots

  • y-axis:
  • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
  • x-axis:
  • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
  • experiments
  • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
  • color code
  • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
  • significnace:
  • asterisks (*) mark significant changes (details)
  • multiple spots:
  • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
  • protein overlap:
  • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
  • plot order:
  • based on function (1st) and locus (2nd)
 
  • PyrB
  • SACOL1212
  • aspartate carbamoyltransferase
  • show on gel show on gel
  • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: pyrimidine ribonucleotide biosynthesis)
  • regulation: PyrR
  • expression plot for PyrB
  • PyrC
  • SACOL1213
  • dihydroorotase
  • show on gel show on gel
  • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: pyrimidine ribonucleotide biosynthesis)
  • co-localization with: FabF (diamide, paraquat, NO, fermentation, NO3 resp., heat, puromycin, mupi.)
  • regulation: PyrR
  • expression plot for PyrC
  • CarA
  • SACOL1214
  • carbamoyl-phosphate synthase, small subunit
  • show on gel show on gel
  • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: pyrimidine ribonucleotide biosynthesis)
  • regulation: PyrR
  • expression plot for CarA
  • CarB
  • SACOL1215
  • carbamoyl-phosphate synthase, large subunit
  • show on gel show on gel
  • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: pyrimidine ribonucleotide biosynthesis)
  • regulation: PyrR
  • expression plot for CarB
  • PyrF
  • SACOL1216
  • orotidine 5-phosphate decarboxylase
  • show on gel show on gel
  • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: pyrimidine ribonucleotide biosynthesis)
  • regulation: PyrR
  • expression plot for PyrF
  • PyrE
  • SACOL1217
  • orotate phosphoribosyltransferase
  • show on gel show on gel
  • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: pyrimidine ribonucleotide biosynthesis)
  • co-localization with: SodA2 1 (paraquat, fermentation)
  • regulation: PyrR
  • expression plot for PyrE
 

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