Proteomic Signature Library for
Staphylococcus aureus COL

summary

  • modus:
  • browse modus (regulation filter)
  • selected regulators/regulatory elements:
  • NrdR
  • threshold filter:
  • 2-fold change
  • matching:
  • 4 expression profiles
  • sorting:
  • based on function (1st) and locus (2nd)
 

expression plots

  • y-axis:
  • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
  • x-axis:
  • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
  • experiments
  • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
  • color code
  • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
  • significnace:
  • asterisks (*) mark significant changes (details)
  • multiple spots:
  • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
  • protein overlap:
  • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
  • plot order:
  • based on function (1st) and locus (2nd)
 
  • NrdE 1 (2)
  • SACOL0792
  • ribonucleoside-diphosphate reductase, alpha subunit
  • show on gel show on gel
  • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: 2'-deoxyribonucleotide metabolism)
  • co-localization with: ThrS 2 (H2O2, NO), ThrS 1 (H2O2, diamide), ThrS 3 (paraquat)
  • regulation: NrdR
  • expression plot for NrdE 1
  • NrdE 2 (2)
  • SACOL0792
  • ribonucleoside-diphosphate reductase, alpha subunit
  • show on gel show on gel
  • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: 2'-deoxyribonucleotide metabolism)
  • co-localization with: Pyk 2 (fermentation, NO3 resp.)
  • regulation: NrdR
  • expression plot for NrdE 2
  • NrdF 1 (2)
  • SACOL0793
  • ribonucleoside-diphosphate reductase 2, beta subunit
  • show on gel show on gel
  • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: 2'-deoxyribonucleotide metabolism)
  • regulation: NrdR
  • expression plot for NrdF 1
  • NrdF 2 (2)
  • SACOL0793
  • ribonucleoside-diphosphate reductase 2, beta subunit
  • show on gel show on gel
  • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: 2'-deoxyribonucleotide metabolism)
  • regulation: NrdR
  • expression plot for NrdF 2
 

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