Proteomic Signature Library for
Staphylococcus aureus COL

summary

  • modus:
  • browse modus (regulation filter)
  • selected regulators/regulatory elements:
  • LexA
  • threshold filter:
  • 2-fold change
  • matching:
  • 9 expression profiles
  • sorting:
  • based on function (1st) and locus (2nd)
 

expression plots

  • y-axis:
  • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
  • x-axis:
  • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
  • experiments
  • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
  • color code
  • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
  • significnace:
  • asterisks (*) mark significant changes (details)
  • multiple spots:
  • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
  • protein overlap:
  • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
  • plot order:
  • based on function (1st) and locus (2nd)
 
  • SACOL2161
  • SACOL2161
  • UTP-glucose-1-phosphate uridylyltransferase family protein
  • show on gel show on gel
  • cell envelope (cell envelope: biosynthesis and degradation of surface polysaccharides and lipopolysaccharides)
  • regulation: CcpA, LexA
  • expression plot for SACOL2161
  • UvrA 1 (2)
  • SACOL0824
  • excinuclease ABC, A subunit
  • show on gel show on gel
  • dna metabolism (dna metabolism: dna replication, recombination, and repair)
  • regulation: LexA
  • expression plot for UvrA 1
  • UvrA 2 (2)
  • SACOL0824
  • excinuclease ABC, A subunit
  • show on gel show on gel
  • dna metabolism (dna metabolism: dna replication, recombination, and repair)
  • regulation: LexA
  • expression plot for UvrA 2
  • SACOL1304
  • SACOL1304
  • recA protein
  • show on gel show on gel
  • dna metabolism (dna metabolism: dna replication, recombination, and repair)
  • regulation: LexA
  • expression plot for SACOL1304
  • ParC 1 (2)
  • SACOL1390
  • DNA topoisomerase IV, A subunit
  • show on gel show on gel
  • dna metabolism (dna metabolism: dna replication, recombination, and repair)
  • regulation: LexA
  • expression plot for ParC 1
  • ParC 2 (2)
  • SACOL1390
  • DNA topoisomerase IV, A subunit
  • show on gel show on gel
  • dna metabolism (dna metabolism: dna replication, recombination, and repair)
  • regulation: LexA
  • expression plot for ParC 2
  • SACOL0789 1 (2)
  • SACOL0789
  • GTP cyclohydrolase I family protein
  • show on gel show on gel
  • unknown function or specifity (unknown function: enzymes of unknown specificity)
  • regulation: LexA
  • expression plot for SACOL0789 1
  • SACOL0789 2 (2)
  • SACOL0789
  • GTP cyclohydrolase I family protein
  • show on gel show on gel
  • unknown function or specifity (unknown function: enzymes of unknown specificity)
  • regulation: LexA
  • expression plot for SACOL0789 2
  • SACOL2000
  • SACOL2000
  • aminotransferase, putative
  • show on gel show on gel
  • unknown function or specifity (unknown function: enzymes of unknown specificity)
  • regulation: LexA
  • expression plot for SACOL2000
 

save & share