Proteomic Signature Library for
Staphylococcus aureus COL

summary

  • modus:
  • browse modus (regulation filter)
  • selected regulators/regulatory elements:
  • CymR
  • threshold filter:
  • 2-fold change
  • matching:
  • 6 expression profiles
  • sorting:
  • based on function (1st) and locus (2nd)
 

expression plots

  • y-axis:
  • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
  • x-axis:
  • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
  • experiments
  • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
  • color code
  • changes higher (lower) than 2x (0.5x) are colored in orange (magenta)
  • significnace:
  • asterisks (*) mark significant changes (details)
  • multiple spots:
  • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
  • protein overlap:
  • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
  • plot order:
  • based on function (1st) and locus (2nd)
 
  • SACOL0503
  • SACOL0503
  • trans-sulfuration enzyme family protein
  • show on gel show on gel
  • amino acid biosynthesis (amino acid biosynthesis: aspartate family)
  • regulation: CymR
  • expression plot for SACOL0503
  • CysK 1 (3)
  • SACOL0557
  • cysteine synthase
  • show on gel show on gel
  • amino acid biosynthesis (amino acid biosynthesis: serine family)
  • regulation: CymR
  • expression plot for CysK 1
  • CysK 2 (3)
  • SACOL0557
  • cysteine synthase
  • show on gel show on gel
  • amino acid biosynthesis (amino acid biosynthesis: serine family)
  • regulation: CymR
  • expression plot for CysK 2
  • CysK 3 (3)
  • SACOL0557
  • cysteine synthase
  • show on gel show on gel
  • amino acid biosynthesis (amino acid biosynthesis: serine family)
  • regulation: CymR
  • expression plot for CysK 3
  • LuxS
  • SACOL2126
  • autoinducer-2 production protein LuxS
  • show on gel show on gel
  • regulation (cellular processes: other)
  • regulation: CymR
  • expression plot for LuxS
  • SACOL0157
  • SACOL0157
  • conserved hypothetical protein
  • show on gel show on gel
  • unknown function or specifity (hypothetical proteins: conserved)
  • regulation: CodY, CymR
  • expression plot for SACOL0157
 

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