Proteomic Signature Library for
Staphylococcus aureus COL

summary

  • modus:
  • search modus
  • input:
  • 4 unique entries
  • matching:
  • 10 expression profiles
  • highlighter:
  • 2.5-fold change
  • sorting:
  • based on function (1st) and locus (2nd)
 

expression plots

  • y-axis:
  • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
  • x-axis:
  • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
  • experiments
  • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
  • color code
  • changes higher (lower) than 2.5x (0.4x) are colored in orange (magenta)
  • significnace:
  • asterisks (*) mark significant changes (details)
  • multiple spots:
  • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
  • protein overlap:
  • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
  • plot order:
  • based on function (1st) and locus (2nd)
 
  • SodA1
  • SACOL0118
  • superoxide dismutase
  • show on gel show on gel
  • detoxification (cellular processes: detoxification)
  • regulation: CodY, SigB-
  • expression plot for SodA1
  • KatA 1 (5)
  • SACOL1368
  • catalase
  • show on gel show on gel
  • detoxification (cellular processes: detoxification)
  • co-localization with: SerA 1 (paraquat, NO)
  • regulation: CodY, PerR, SigB+
  • expression plot for KatA 1
  • KatA 2 (5)
  • SACOL1368
  • catalase
  • show on gel show on gel
  • detoxification (cellular processes: detoxification)
  • co-localization with: SerA 2 (paraquat, NO), Zwf 1 (paraquat)
  • regulation: CodY, PerR, SigB+
  • expression plot for KatA 2
  • KatA 3 (5)
  • SACOL1368
  • catalase
  • show on gel show on gel
  • detoxification (cellular processes: detoxification)
  • co-localization with: Zwf 2 (H2O2, paraquat), SdhA (H2O2)
  • regulation: CodY, PerR, SigB+
  • expression plot for KatA 3
  • KatA 4 (5)
  • SACOL1368
  • catalase
  • show on gel show on gel
  • detoxification (cellular processes: detoxification)
  • regulation: CodY, PerR, SigB+
  • expression plot for KatA 4
  • KatA 5 (5)
  • SACOL1368
  • catalase
  • show on gel show on gel
  • detoxification (cellular processes: detoxification)
  • co-localization with: SerA 2 (H2O2), SufD 2 (H2O2, paraquat), SufD 1 (H2O2, paraquat)
  • regulation: CodY, PerR, SigB+
  • expression plot for KatA 5
  • SodA2 1 (2)
  • SACOL1610
  • superoxide dismutase
  • show on gel show on gel
  • detoxification (cellular processes: detoxification)
  • co-localization with: PyrE (paraquat, fermentation)
  • regulation: CodY
  • expression plot for SodA2 1
  • SodA2 2 (2)
  • SACOL1610
  • superoxide dismutase
  • show on gel show on gel
  • detoxification (cellular processes: detoxification)
  • regulation: CodY
  • expression plot for SodA2 2
  • TrxB 1 (2)
  • SACOL0829
  • thioredoxin-disulfide reductase
  • show on gel show on gel
  • detoxification (energy metabolism: electron transport)
  • expression plot for TrxB 1
  • TrxB 2 (2)
  • SACOL0829
  • thioredoxin-disulfide reductase
  • show on gel show on gel
  • detoxification (energy metabolism: electron transport)
  • co-localization with: MvaD (H2O2, diamide, paraquat, NO, fermentation, NO3 resp., heat, puromycin, mupi.)
  • expression plot for TrxB 2
 

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