Proteomic Signature Library for
Staphylococcus aureus COL

summary

  • modus:
  • search modus
  • input:
  • 22 unique entries
  • matching:
  • 22 expression profiles
  • highlighter:
  • 2.5-fold change
  • sorting:
  • based on function (1st) and locus (2nd)
 

expression plots

  • y-axis:
  • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
  • x-axis:
  • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
  • experiments
  • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
  • color code
  • changes higher (lower) than 2.5x (0.4x) are colored in orange (magenta)
  • significnace:
  • asterisks (*) mark significant changes (details)
  • multiple spots:
  • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
  • protein overlap:
  • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
  • plot order:
  • based on function (1st) and locus (2nd)
 
  • CysK 1 (3)
  • SACOL0557
  • cysteine synthase
  • show on gel show on gel
  • amino acid biosynthesis (amino acid biosynthesis: serine family)
  • regulation: CymR
  • expression plot for CysK 1
  • NadE
  • SACOL1974
  • NH(3)-dependent NAD+ synthetase
  • show on gel show on gel
  • biosynthesis of cofactors, prosthetic groups, and carriers (biosynthesis of cofactors, prosthetic groups, and carriers: pyridine nucleotides)
  • co-localization with: SACOL1402 (H2O2, NO)
  • expression plot for NadE
  • SACOL0004
  • SACOL0004
  • recF protein
  • show on gel show on gel
  • dna metabolism (dna metabolism: dna replication, recombination, and repair)
  • expression plot for SACOL0004
  • GyrA 2 (2)
  • SACOL0006
  • DNA gyrase, A subunit
  • show on gel show on gel
  • dna metabolism (dna metabolism: dna replication, recombination, and repair)
  • co-localization with: Pyc 1 (H2O2, diamide, paraquat, NO, fermentation, NO3 resp., heat, puromycin, mupi.)
  • expression plot for GyrA 2
  • FabI 3 (3)
  • SACOL1016
  • enoyl-(acyl-carrier-protein) reductase
  • show on gel show on gel
  • fatty acid and phospholipid metabolism (fatty acid and phospholipid metabolism: biosynthesis)
  • regulation: FapR
  • expression plot for FabI 3
  • Pgk 3 (5)
  • SACOL0839
  • phosphoglycerate kinase
  • show on gel show on gel
  • glycolysis/gluconeogenesis (energy metabolism: glycolysis/gluconeogenesis)
  • co-localization with: Pgk 2 (H2O2, diamide, paraquat, mupi.)
  • regulation: GapR
  • expression plot for Pgk 3
  • NrdF 1 (2)
  • SACOL0793
  • ribonucleoside-diphosphate reductase 2, beta subunit
  • show on gel show on gel
  • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: 2'-deoxyribonucleotide metabolism)
  • regulation: NrdR
  • expression plot for NrdF 1
  • NrdF 2 (2)
  • SACOL0793
  • ribonucleoside-diphosphate reductase 2, beta subunit
  • show on gel show on gel
  • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: 2'-deoxyribonucleotide metabolism)
  • regulation: NrdR
  • expression plot for NrdF 2
  • PurK
  • SACOL1074
  • phosphoribosylaminoimidazole carboxylase, ATPase subunit
  • show on gel show on gel
  • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: purine ribonucleotide biosynthesis)
  • co-localization with: SACOL1209 (diamide)
  • regulation: PurR
  • expression plot for PurK
  • PyrC
  • SACOL1213
  • dihydroorotase
  • show on gel show on gel
  • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: pyrimidine ribonucleotide biosynthesis)
  • co-localization with: FabF (diamide, paraquat, NO, fermentation, NO3 resp., heat, puromycin, mupi.)
  • regulation: PyrR
  • expression plot for PyrC
  • CarA
  • SACOL1214
  • carbamoyl-phosphate synthase, small subunit
  • show on gel show on gel
  • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: pyrimidine ribonucleotide biosynthesis)
  • regulation: PyrR
  • expression plot for CarA
  • CarB
  • SACOL1215
  • carbamoyl-phosphate synthase, large subunit
  • show on gel show on gel
  • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: pyrimidine ribonucleotide biosynthesis)
  • regulation: PyrR
  • expression plot for CarB
  • PyrF
  • SACOL1216
  • orotidine 5-phosphate decarboxylase
  • show on gel show on gel
  • nucleotide metabolism (purines, pyrimidines, nucleosides, and nucleotides: pyrimidine ribonucleotide biosynthesis)
  • regulation: PyrR
  • expression plot for PyrF
  • AcnA 1 (2)
  • SACOL1385
  • aconitate hydratase
  • show on gel show on gel
  • pyruvate dehydrogenase and tca cyle (energy metabolism: tca cycle)
  • co-localization with: AcnA 2 (fermentation)
  • regulation: CcpA, Fur
  • expression plot for AcnA 1
  • AcnA 2 (2)
  • SACOL1385
  • aconitate hydratase
  • show on gel show on gel
  • pyruvate dehydrogenase and tca cyle (energy metabolism: tca cycle)
  • co-localization with: AcnA 1 (fermentation)
  • regulation: CcpA, Fur
  • expression plot for AcnA 2
  • SACOL2335
  • SACOL2335
  • ABC transporter, ATP-binding protein
  • show on gel show on gel
  • transport (transport and binding proteins: unknown substrate)
  • regulation: SigB-
  • expression plot for SACOL2335
  • SACOL0427 1 (2)
  • SACOL0427
  • conserved hypothetical protein
  • show on gel show on gel
  • unknown function or specifity (hypothetical proteins: conserved)
  • co-localization with: YycF (paraquat)
  • regulation: CodY, T-box(Met)
  • expression plot for SACOL0427 1
  • SACOL1386
  • SACOL1386
  • conserved hypothetical protein TIGR00051
  • show on gel show on gel
  • unknown function or specifity (hypothetical proteins: conserved)
  • expression plot for SACOL1386
  • SACOL1483
  • SACOL1483
  • conserved hypothetical protein
  • show on gel show on gel
  • unknown function or specifity (hypothetical proteins: conserved)
  • expression plot for SACOL1483
  • SACOL1985
  • SACOL1985
  • conserved hypothetical protein
  • show on gel show on gel
  • unknown function or specifity (hypothetical proteins: conserved)
  • regulation: SigB-
  • expression plot for SACOL1985
  • SACOL0917
  • SACOL0917
  • NifU domain protein
  • show on gel show on gel
  • unknown function or specifity (unknown function: general)
  • co-localization with: RsbW 1 (diamide, paraquat, NO, fermentation, NO3 resp., puromycin, mupi.)
  • regulation: PerR
  • expression plot for SACOL0917
  • SACOL1445
  • SACOL1445
  • CbbQ/NirQ/NorQ/GpvN family protein
  • show on gel show on gel
  • unknown function or specifity (unknown function: general)
  • expression plot for SACOL1445
 

save & share