Proteomic Signature Library for
Staphylococcus aureus COL

summary

  • modus:
  • search modus
  • input:
  • 6 unique entries
  • matching:
  • 7 expression profiles
  • highlighter:
  • 2.5-fold change
  • sorting:
  • based on function (1st) and locus (2nd)
 

expression plots

  • y-axis:
  • change of expression (binary logarithm) compared to the control at 0 min of the corresponding experiment
  • x-axis:
  • time after stress in minutes (time points of additional unstressed controls are introduced by "c")
  • experiments
  • hydrogen peroxide (abbr.: H2O2, O), diamide (abbr.: D), paraquat (abbr.: P), nitric oxide (abbr.: NO, N), fermentation (abbr.: F), nitrate respiration (abbr.: NO3 resp., A), heat (abbr.: H), puromycin (abbr.: U), mupirocin (abbr.: mupi., M)
  • color code
  • changes higher (lower) than 2.5x (0.4x) are colored in orange (magenta)
  • significnace:
  • asterisks (*) mark significant changes (details)
  • multiple spots:
  • multiple spots for one and the same protein are extended by a spot number (sum of all individual spots of this protein is given in parentheses)
  • protein overlap:
  • overlapping of different proteins are listed with the abbreviation (letter) of the corresponding experiment where protein overlapping have been observed
  • plot order:
  • based on function (1st) and locus (2nd)
 
  • YycF
  • SACOL0019
  • DNA-binding response regulator YycF
  • show on gel show on gel
  • regulation (regulatory functions: dna interactions)
  • co-localization with: SACOL0613 (H2O2), SACOL0427 1 (paraquat)
  • regulation: Rex
  • expression plot for YycF
  • SACOL0157
  • SACOL0157
  • conserved hypothetical protein
  • show on gel show on gel
  • unknown function or specifity (hypothetical proteins: conserved)
  • regulation: CodY, CymR
  • expression plot for SACOL0157
  • SACOL0467
  • SACOL0467
  • conserved hypothetical protein
  • show on gel show on gel
  • unknown function or specifity (hypothetical proteins: conserved)
  • expression plot for SACOL0467
  • SACOL0931
  • SACOL0931
  • hydrolase, haloacid dehalogenase-like family
  • show on gel show on gel
  • unknown function or specifity (unknown function: enzymes of unknown specificity)
  • expression plot for SACOL0931
  • SACOL1894
  • SACOL1894
  • HIT family protein
  • show on gel show on gel
  • unknown function or specifity (unknown function: general)
  • co-localization with: SACOL1189 (diamide)
  • expression plot for SACOL1894
  • SACOL1891 1 (2)
  • SACOL1891
  • RNAIII-activating protein TRAP
  • show on gel show on gel
  • virulence (cellular processes: pathogenesis)
  • expression plot for SACOL1891 1
  • SACOL1891 2 (2)
  • SACOL1891
  • RNAIII-activating protein TRAP
  • show on gel show on gel
  • virulence (cellular processes: pathogenesis)
  • expression plot for SACOL1891 2
 

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